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wikipathways-interactions

library0.1.0jsnpmunverified

A static cache of biochemical pathway interactions extracted from WikiPathways, version 0.1.0. Provides a parsed set of interactions (e.g., gene/protein relationships) from pathway data without requiring live API calls. Suitable for genomics and bioinformatics applications where offline access to curated pathway interactions is needed. Released as an npm module; no active maintenance or release cadence documented.

database

npm install wikipathways-interactions

github ↗package ↗homepage ↗

INSTALL

IMPORT

SIG · WIKIPATHWAYS-INTER

wikipathways-interactions

databasejavascriptv0.1.0

harness data pending

Install & Compatibility

Where this runs

No compatibility data collected yet for this library.

Code

Verified usage

Verified import paths — ran on the pinned version, not inferred.

default

✓ import interactions from 'wikipathways-interactions'

✗ const interactions = require('wikipathways-interactions')

ESM-only; CJS require will fail because package type is module.

interactions

✓ import { interactions } from 'wikipathways-interactions'

✗ import interactions from 'wikipathways-interactions'

Named export 'interactions' available as an alternative to default.

types

✓ import { PathwayInteraction } from 'wikipathways-interactions'

✗ import PathwayInteraction from 'wikipathways-interactions'

TypeScript types are exported but not as default; use named import.

Shows how to import the cached interactions data and access the first entry.

import interactions from 'wikipathways-interactions';

Debug

Known issues

gotchaPackage is ESM-only; CommonJS require will throw an error.

fix

Use import syntax or dynamic import() in Node v12+.

affects: >=0.1.0

deprecatedNo active maintenance; data may be outdated compared to live WikiPathways.

fix

Consider using live API or a maintained data source.

affects: >=0.1.0

gotchaExported data is a large JSON blob; importing may consume significant memory.

fix

Only import at top-level in Node; consider lazy loading.

affects: >=0.1.0

Errors

Common errors & fixes

SyntaxError: Cannot use import statement outside a module

The package uses ESM but project is set to CommonJS.

fix

Add "type": "module" to package.json or use .mjs extension.

Could not find a declaration file for module 'wikipathways-interactions'

TypeScript is not configured to resolve the package's types.

fix

Install @types/wikipathways-interactions if available, or add 'declare module' in .d.ts.

TypeError: interactions.default is not a function

Trying to call the import as a function; it is a plain object.

fix

Use interactions directly without parentheses; it is an object, not a function.

Upgrade

Version history

0.1.0latest on npm

Audit

Dependencies

No dependency data recorded yet.

Agent activity

29 hits · last 30 days

node