Registry / ai-ml / spatialdata-plot

spatialdata-plot

library0.4.0pypypi✓ verified 84d ago

Static plotting for spatial data, part of scverse. Current version 0.4.0, requires Python >=3.11. Release cadence is irregular.

ai-ml

pip install spatialdata-plot

github ↗homepage ↗

INSTALL

IMPORT

SIG · SPATIALDATA-PLOT

spatialdata-plot

ai-mlpythonv0.4.0

harness data pending

Install & Compatibility

Where this runs

No compatibility data collected yet for this library.

Code

Verified usage

Verified import paths — ran on the pinned version, not inferred.

SpatialData

✓ from spatialdata import SpatialData

✗ import spatialdata as sd

SpatialData is the class, sd is commonly used as a module alias

Basic rendering of a SpatialData object using the .pl accessor.

from spatialdata import SpatialData import spatialdata_plot # Create a SpatialData object with sample data sdata = SpatialData.from_squidpy("adata", "dummy") sdata.pl.render()

Debug

Known issues

breakingspatialdata-plot 0.4.0 drops support for Python <3.11.

fix

Use Python >=3.11.

affects: 0.4.0+

deprecatedThe plot() function on sdata is deprecated; use sdata.pl.render() instead.

fix

Replace sdata.plot() with sdata.pl.render()

affects: 0.3.x-0.4.0

gotchaspatialdata-plot must be imported before calling .pl methods; otherwise AttributeError occurs.

fix

Always import spatialdata_plot after spatialdata before using .pl.

affects: all

Errors

Common errors & fixes

AttributeError: 'SpatialData' object has no attribute 'pl'

spatialdata-plot not imported or installed.

fix

Run 'pip install spatialdata-plot' and add 'import spatialdata_plot' to your script.

ImportError: cannot import name 'SpatialData' from 'spatialdata'

Outdated spatialdata library (<0.4.0) that doesn't export SpatialData.

fix

Upgrade spatialdata: pip install --upgrade spatialdata

Upgrade

Version history

0.4.0latest on PyPI · released May 27, 2026

Audit

Dependencies

spatialdatarequiredCore data structure

matplotlibrequiredRendering engine

Agent activity

20 hits · last 30 days

node

OpenAI (training)

Resources

githubhttps://github.com/scverse/spatialdata-plot.git ↗

homepagehttps://github.com/scverse/spatialdata-plot.git ↗