rust-htslib

library1.0.0rscratesunverified

This library provides HTSlib bindings and a high level Rust API for reading and writing BAM files.

# Cargo.toml
[dependencies]
rust-htslib = "1.0.0"

github ↗homepage ↗docs ↗

INSTALL

IMPORT

SIG · RUST-HTSLIB

rust-htslib

otherrustv1.0.0

harness data pending

Install & Compatibility

Where this runs

No compatibility data collected yet for this library.

Code

Verified usage

Verified import paths — ran on the pinned version, not inferred.

Reader

✓ use rust_htslib::bam::Reader;

Opening a BAM file and iterating over its records.

use rust_htslib::bam::Reader; let mut reader = Reader::from_path("input.bam").unwrap(); for result in reader.records() { let record = result.unwrap(); // process record }

Debug

Known issues

gotchaRequires HTSlib C library installed on the system

fix

Install htslib via package manager or build from source

affects: >=0.1.0

Upgrade

Version history

1.0.0latest on crates.io

Audit

Dependencies

No dependency data recorded yet.

Agent activity

6 hits · last 30 days

node

Resources

githubhttps://github.com/rust-bio/rust-htslib ↗

homepagehttps://github.com/rust-bio/rust-htslib ↗

docshttps://docs.rs/rust-htslib/ ↗