bdg-formats

library1.0.3javamavenunverified

BDG Formats provides data format schemas for genomic data in the Big Data Genomics project.

<dependency>
  <groupId>org.bdgenomics.bdg-formats</groupId>
  <artifactId>bdg-formats</artifactId>
  <version>1.0.3</version>
</dependency>

github ↗homepage ↗docs ↗

INSTALL

IMPORT

SIG · BDG-FORMATS

bdg-formats

serializationjavav1.0.3

harness data pending

Install & Compatibility

Where this runs

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Code

Verified usage

Verified import paths — ran on the pinned version, not inferred.

Genotype

✓ org.bdgenomics.formats.avro.Genotype

Creates a Genotype Avro record for genomic data.

import org.bdgenomics.formats.avro.Genotype; Genotype genotype = Genotype.newBuilder() .setSampleId("sample1") .setVariant(new Variant()) .build(); System.out.println(genotype.getSampleId());

Debug

Known issues

No known issues recorded.

Upgrade

Version history

1.0.3latest on Maven

Audit

Dependencies

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Agent activity

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OpenAI (training)

Resources

githubhttps://github.com/bigdatagenomics/bdg-formats ↗

homepagehttps://github.com/bigdatagenomics/bdg-formats ↗

docshttps://appdoc.app/artifact/org.bdgenomics.bdg-formats/bdg-formats/ ↗