SCMCP

httpnone★ 15development

A natural language interface for single-cell RNA sequencing (scRNA-Seq) analysis, supporting various modules from IO to enrichment.

Install

How to run this server

[ { "cmd": "pip install scmcp", "imports": [] } ]

server path: scmcp

Tools

What this server exposes

IO module

Read and write scRNA-Seq data with natural language

Preprocessing module

Filtering, quality control, normalization, scaling, highly-variable genes, PCA, Neighbors

Tool module

Clustering, differential expression, etc.

Plotting module

Violin plots, heatmaps, dotplots

Cell-cell communication analysis

Analyze cell-cell communication

Pseudotime analysis

Perform pseudotime analysis

Enrichment analysis

Perform enrichment analysis

Configuration

Environment & auth

authnone

Resources