Scanpy-MCP

httpnone★ 2development

A natural language interface for single-cell RNA sequencing (scRNA-Seq) analysis using the Scanpy library.

Install

How to run this server

[ { "cmd": "pip install scanpy-mcp", "imports": [] } ]

server path: scanpy-mcp

Tools

What this server exposes

IO module

Read and write scRNA-Seq data

Preprocessing module

Filtering, quality control, normalization, scaling, highly-variable genes, PCA, Neighbors

Tool module

Clustering, differential expression

Plotting module

Violin, heatmap, dotplot

Configuration

Environment & auth

authnone

Resources