Infercnv-MCP

httpnone★ 1development

Infer Copy Number Variations (CNVs) from single-cell RNA-Seq data using a natural language interface.

Install

How to run this server

[ { "cmd": "pip install infercnv-mcp", "imports": [] } ]

server path: infercnv-mcp

Tools

What this server exposes

IO module

Read and write scRNA-Seq data, load gene positions

Preprocessing module

Compute neighbors and prepare data for CNV inference

Tool module

Infer CNVs and compute CNV scores

Plotting module

Generate chromosome heatmaps, UMAP, and t-SNE visualizations

Configuration

Environment & auth

authnone

Resources