Decoupler MCP

httpnone★ 4development

A natural language interface for biological activities analysis using the decoupler tool.

Install

How to run this server

[ { "cmd": "pip install decoupler-mcp", "imports": [] } ]

server path: decoupler-mcp

Tools

What this server exposes

IO module

Read and write scRNA-Seq data

Pathway activity/Transcription factor inference

Infer pathway activity and transcription factor activity from scRNA-Seq data

Tool module

Perform clustering, differential expression, and other scRNA-Seq analysis tasks

Plotting module

Generate plots such as violin plots, UMAP, and t-SNE visualizations

Configuration

Environment & auth

authnone

Resources