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OpenCRAVAT

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Genetic variant annotation

Install
How to run this server

No install command recorded.

server path: opencravat
Tools
What this server exposes
get_annotators
Discover which OpenCRAVAT annotators are being run (a curated default set)
get_annotator_schema
Inspect annotator output schemas (field names/types/descriptions)
annotate_variant
Annotate variants by genomic coordinates (chrom/pos/ref/alt). Accepts only GRCh38/hg38 coordinates
annotate_rsid
Annotate variants by dbSNP rsID
annotate_caid
Annotate variants by ClinGen Allele Registry ID (CAid)
annotate_hgvs
Annotate variants by HGVS notation (g./c./p.)
convert_protein_to_hgvs
Convert a protein missense notation (e.g., BRAF V600E) into candidate GRCh38 genomic HGVS changes (via SynVar), which you can then pass to HGVS annotation
Configuration
Environment & auth
authnone
Resources
OpenCRAVAT — MCP Server · libregistry