Biomart MCP

httpnone★ 7database

Interface with Biomart, a biological data query tool, using the pybiomart Python package.

Install

How to run this server

[ { "cmd": "npx -y @smithery/cli", "imports": [] } ]

server path: biomart-mcp

Tools

What this server exposes

list_marts

List available marts in the Biomart database

list_datasets

List available datasets for a given mart

get_attributes

View common or all available attributes for a specific dataset

get_filters

View common or all available filters for a specific dataset

query_biomart

Query Biomart with specific attributes and filters to get biological data

translate_ids

Convert between different biological identifiers (e.g., gene symbols to Ensembl IDs)

Configuration

Environment & auth

authnone

Resources