MCP Servers / search / Bio-MCP BLAST

Bio-MCP BLAST

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Perform NCBI BLAST sequence similarity searches through natural language.

Install

How to run this server

[ { "cmd": "pip install -e", "imports": [] } ]

server path: bio-mcp-blast

Tools

What this server exposes

blastn

Nucleotide-nucleotide BLAST search

blastp

Protein-protein BLAST search

makeblastdb

Create BLAST database from FASTA file

blastn_async

Submit nucleotide search to queue

blastp_async

Submit protein search to queue

get_job_status

Check job progress

get_job_result

Retrieve completed results

Configuration

Environment & auth

authnone

envBIO_MCP_QUEUE_URL

Resources