MCP Servers / other / bioinformatics-mcp-server

bioinformatics-mcp-server

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Bioinformatics data for AI agents â gene search, protein structures, clinical variants, PubMed literature, and DNA sequences via NCBI and UniProt. No API key required.

github ↗

Install

How to run this server

[ { "cmd": "pip install bioinformatics-mcp-server", "imports": [] } ]

server path: bioinformatics-mcp-server

Tools

What this server exposes

search_genes

Search genes by symbol, name, or function

get_gene_details

Full gene info by NCBI Gene ID

search_clinvar_variants

Clinical variants and mutations

get_taxonomy

Taxonomic classification of organisms

get_ncbi_sequence

DNA/protein sequences (FASTA/GenBank)

search_proteins

Search proteins by name, gene, or organism

get_protein_details

Protein details by UniProt accession

search_pubmed

Search biomedical literature

get_pubmed_abstract

Full abstract of a PubMed article

get_pubmed_citations

Articles citing a specific publication

Configuration

Environment & auth

authnone

Resources

githubhttps://github.com/AiAgentKarl/bioinformatics-mcp-server ↗